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  • Negative cofitness for PS417_03485 from Pseudomonas simiae WCS417

    type III secretion protein
    SEED: Type III secretion inner membrane protein (YscQ,homologous to flagellar export components)
    KEGG: type III secretion protein SctQ

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_20325 hypothetical protein -0.22
    2 PS417_15695 molybdenum cofactor biosynthesis protein A -0.21
    3 PS417_27560 adenylate cyclase -0.21
    4 PS417_15710 nitrate reductase -0.20
    5 PS417_05785 tail protein -0.20
    6 PS417_19220 hypothetical protein -0.20
    7 PS417_15690 ribonucleoside-triphosphate reductase -0.20
    8 PS417_16165 ABC transporter substrate-binding protein -0.20
    9 PS417_28195 amino acid ABC transporter permease -0.19
    10 PS417_10220 hypothetical protein -0.19
    11 PS417_20235 hypothetical protein -0.19
    12 PS417_25970 diguanylate cyclase -0.19
    13 PS417_01820 chemotaxis protein -0.19
    14 PS417_02985 diguanylate cyclase -0.19
    15 PS417_07380 hypothetical protein -0.19
    16 PS417_11530 amidase -0.19
    17 PS417_14450 chemotaxis protein -0.19
    18 PS417_01055 methyltransferase -0.18
    19 PS417_07260 2-deoxy-D-ribonate transporter 2 (from data) -0.18
    20 PS417_12785 hypothetical protein -0.18

    Or look for positive cofitness