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  • Negative cofitness for GFF6824 from Variovorax sp. SCN45

    Pyruvate:Oxaloacetate transcarboxylase domain protein
    SEED: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1131 putative fatty acid desaturase -0.58
    2 GFF6391 RfbJ protein -0.58
    3 GFF7362 Enoyl-CoA hydratase (EC 4.2.1.17) -0.57
    4 GFF4440 Ribosomal protein L11 methyltransferase -0.55
    5 GFF5777 5-keto-D-gluconate 5-reductase (EC 1.1.1.69) -0.54
    6 GFF3577 Transcriptional regulator, LysR family -0.54
    7 GFF7273 UDP-glucose 4-epimerase (EC 5.1.3.2) -0.53
    8 GFF5817 Two-component system sensor histidine kinase -0.53
    9 GFF5663 ABC transporter, fused permease protein -0.52
    10 GFF4863 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.52
    11 GFF1967 FAD linked oxidase-like -0.50
    12 GFF1017 conserved hypothetical protein-transmembrane prediction -0.49
    13 GFF1889 Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate -0.49
    14 GFF2924 BUG/TctC family periplasmic protein -0.49
    15 GFF6853 Putative transmembrane sensor -0.48
    16 GFF7164 hypothetical protein -0.48
    17 GFF2439 no description -0.48
    18 GFF4565 GGDEF domain protein -0.48
    19 GFF6972 no description -0.47
    20 GFF4168 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.47

    Or look for positive cofitness