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  • Negative cofitness for GFF6800 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
    SEED: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
    KEGG: polar amino acid transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7156 hypothetical protein -0.66
    2 GFF7294 PTS IIA-like nitrogen-regulatory protein PtsN -0.66
    3 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) -0.66
    4 GFF4488 Metal-binding GTPase YjiA -0.65
    5 GFF6129 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) -0.63
    6 GFF735 no description -0.63
    7 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) -0.63
    8 GFF6432 no description -0.62
    9 GFF446 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) -0.62
    10 GFF3905 Aconitate hydratase 2 (EC 4.2.1.3) -0.62
    11 GFF4383 hypothetical protein -0.61
    12 GFF2815 Primosomal replication protein N -0.61
    13 GFF7363 hypothetical protein -0.61
    14 GFF5677 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) -0.61
    15 GFF4006 DNA polymerase I (EC 2.7.7.7) -0.61
    16 GFF6634 DNA mismatch repair protein MutS -0.60
    17 GFF945 Excinuclease ABC subunit B -0.60
    18 GFF1565 hypothetical protein -0.60
    19 GFF3960 3'-to-5' oligoribonuclease (orn) -0.60
    20 GFF2852 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) -0.60

    Or look for positive cofitness