Negative cofitness for GFF6799 from Variovorax sp. SCN45

ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
SEED: amino acid ABC transporter, permease protein
KEGG: polar amino acid transport system permease protein

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF3326 hypothetical protein -0.53
2 GFF2114 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type -0.52
3 GFF1764 hypothetical protein -0.50
4 GFF2531 Transcriptional regulator, AsnC family -0.50
5 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 -0.50
6 GFF6732 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) -0.49
7 GFF6069 Permease of the drug/metabolite transporter (DMT) superfamily -0.48
8 GFF5004 N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) -0.48
9 GFF4854 Electron transfer flavoprotein, alpha subunit -0.48
10 GFF2625 hypothetical protein -0.48
11 GFF4455 TonB protein -0.46
12 GFF5816 no description -0.46
13 GFF6615 putative plasmid stabilization protein -0.46
14 GFF1925 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases -0.45
15 GFF6241 Transglutaminase-like domain -0.45
16 GFF3671 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.45
17 GFF175 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.45
18 GFF2386 Response regulator BaeR -0.44
19 GFF4620 Gluconolactonase (EC 3.1.1.17) -0.44
20 GFF6644 DNA-binding transcriptional regulator, MocR family / aminotransferase domain -0.44

Or look for positive cofitness