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  • Negative cofitness for PS417_03450 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma-54 factor RpoN

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_20930 50S rRNA methyltransferase -0.24
    2 PS417_07555 ABC transporter ATPase -0.22
    3 PS417_24500 DEAD/DEAH box helicase -0.21
    4 PS417_13455 alkaline proteinase inhibitor -0.19
    5 PS417_03005 arginine decarboxylase -0.18
    6 PS417_24335 50S rRNA methyltransferase -0.18
    7 PS417_08535 enoyl-CoA hydratase -0.18
    8 PS417_17125 transcriptional regulator -0.17
    9 PS417_04025 glycine/betaine ABC transporter permease -0.17
    10 PS417_15310 type VI secretion protein -0.17
    11 PS417_02755 membrane protein -0.17
    12 PS417_04290 hypothetical protein -0.17
    13 PS417_28135 sodium:alanine symporter -0.17
    14 PS417_14580 saccharopine dehydrogenase -0.17
    15 PS417_05830 hypothetical protein -0.16
    16 PS417_02915 precorrin-3B C17-methyltransferase -0.16
    17 PS417_13830 hypothetical protein -0.16
    18 PS417_08685 flagellar hook-length control protein FliK -0.16
    19 PS417_00155 2-dehydro-3-deoxygalactonokinase -0.15
    20 PS417_22120 aldose epimerase -0.15

    Or look for positive cofitness