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  • Negative cofitness for GFF6734 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family
    SEED: transcriptional regulator, AraC family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6752 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 1.2.1.91) / 2-oxepin-2(3H)-ylideneacetyl-CoA hydrolase (EC 3.3.2.12) -0.67
    2 GFF6715 Transcriptional regulator of RpiR family in catabolic operon -0.61
    3 GFF1865 Transcriptional regulator, AraC family -0.58
    4 GFF1792 Transcriptional regulator, IclR family -0.58
    5 GFF605 Aldolase related to tricarballylate utilization -0.57
    6 GFF5849 FIG01210206: hypothetical protein -0.57
    7 GFF4345 hypothetical protein -0.56
    8 GFF653 no description -0.56
    9 GFF2841 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) -0.55
    10 GFF2196 no description -0.55
    11 GFF5831 Ketosteroid isomerase-related protein -0.54
    12 GFF1188 Thiazole synthase (EC 2.8.1.10) -0.54
    13 GFF3017 T6SS AAA+ chaperone ClpV (TssH) -0.54
    14 GFF6015 Transcriptional regulator PA0877, LysR family -0.54
    15 GFF7291 Magnesium and cobalt transport protein CorA -0.54
    16 GFF1019 monooxygenase, FAD-binding -0.53
    17 GFF5023 Ammonium transporter -0.53
    18 GFF1671 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) -0.53
    19 GFF1702 hypothetical protein -0.53
    20 GFF2370 L-carnitine dehydratase/bile acid-inducible protein F -0.53

    Or look for positive cofitness