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  • Negative cofitness for GFF6678 from Variovorax sp. SCN45

    Putative inner membrane protein
    SEED: inner membrane protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7285 Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) -0.61
    2 GFF4374 UPF0758 family protein -0.60
    3 GFF4915 hypothetical protein -0.57
    4 GFF6106 Dienelactone hydrolase family protein -0.56
    5 GFF7313 hypothetical protein -0.55
    6 GFF984 Protein phosphatase 2C-like -0.54
    7 GFF3825 Autolysin sensor kinase (EC 2.7.3.-) -0.52
    8 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB -0.52
    9 GFF2195 FIG00732904: hypothetical protein -0.52
    10 GFF4485 FIG00715336: hypothetical protein -0.51
    11 GFF5322 Type IV pilus biogenesis protein PilP -0.51
    12 GFF7336 Alkanesulfonate utilization operon LysR-family regulator Cbl -0.51
    13 GFF2510 Type IV fimbrial assembly, ATPase PilB -0.51
    14 GFF5321 Type IV pilus biogenesis protein PilO -0.51
    15 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) -0.51
    16 GFF2379 Serine/threonine protein kinase -0.51
    17 GFF3068 FIG00538108: hypothetical protein -0.51
    18 GFF5418 Type IV fimbrial biogenesis protein PilY1 -0.51
    19 GFF33 Type IV pilus biogenesis protein PilZ -0.51
    20 GFF5320 Type IV pilus biogenesis protein PilN -0.50

    Or look for positive cofitness