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  • Negative cofitness for GFF6641 from Variovorax sp. SCN45

    ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines)
    SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7369 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) -0.54
    2 GFF5082 Uncharacterized MFS-type transporter -0.54
    3 GFF6677 regulatory protein -0.54
    4 GFF1128 Alkyl hydroperoxide reductase subunit C-like protein -0.51
    5 GFF3217 hypothetical protein -0.51
    6 GFF1497 BUG/TctC family periplasmic protein -0.51
    7 GFF6573 Conjugative transfer protein TrbF -0.50
    8 GFF1527 Ferrichrome-iron receptor -0.49
    9 GFF4895 FIG074102: hypothetical protein -0.48
    10 GFF6458 Lipid A 4'-phosphatase LpxF-like, putative -0.47
    11 GFF1666 N-methylhydantoinase A (EC 3.5.2.14) -0.47
    12 GFF1739 Glutamate carboxypeptidase (EC 3.4.17.11) -0.47
    13 GFF4955 hypothetical protein -0.47
    14 GFF4249 hypothetical protein -0.46
    15 GFF329 Nucleoside ABC transporter, ATP-binding protein -0.46
    16 GFF4544 RNA polymerase sigma factor RpoE -0.45
    17 GFF2416 Transcriptional regulator YbhD, LysR family -0.45
    18 GFF6829 Glutathione S-transferase (EC 2.5.1.18) -0.45
    19 GFF6905 Chloride channel protein -0.45
    20 GFF7100 similar to protocatechuate 4,5-dioxygenase beta chain -0.45

    Or look for positive cofitness