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  • Negative cofitness for GFF6600 from Variovorax sp. SCN45

    Sulfur carrier protein FdhD
    SEED: Formate dehydrogenase chain D (EC 1.2.1.2)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3100 Aspartyl protease -0.63
    2 GFF1247 Sulfate and thiosulfate binding protein CysP -0.57
    3 GFF2177 no description -0.56
    4 GFF4579 putative oxidoreductase, nitronate monooxygenase family -0.55
    5 GFF1671 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) -0.54
    6 GFF3973 FIG01198345: hypothetical protein -0.54
    7 GFF202 Transcriptional regulator, LysR family -0.53
    8 GFF5140 no description -0.49
    9 GFF7336 Alkanesulfonate utilization operon LysR-family regulator Cbl -0.49
    10 GFF4719 hypothetical protein -0.49
    11 GFF5703 pyridoxal-phosphate dependent enzyme family protein -0.48
    12 GFF6922 Deacetylases, including yeast histone deacetylase and acetoin utilization protein -0.48
    13 GFF1913 Short-chain dehydrogenase -0.47
    14 GFF647 Two-component system response regulator QseB -0.47
    15 GFF96 RNA polymerase ECF-type sigma factor -0.47
    16 GFF836 Vitamin B12 ABC transporter, substrate-binding protein BtuF -0.47
    17 GFF6087 Transcriptional regulator, AcrR family -0.47
    18 GFF701 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.47
    19 GFF2065 Peptidase, M23/M37 family -0.47
    20 GFF867 Oxidoreductase, GMC family -0.47

    Or look for positive cofitness