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  • Negative cofitness for GFF6589 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3726 RND efflux system, membrane fusion protein -0.47
    2 GFF5723 Flagellar protein FlgJ [peptidoglycan hydrolase] -0.47
    3 GFF6133 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.46
    4 GFF1463 Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) -0.46
    5 GFF1009 Transcriptional regulator, AraC family -0.46
    6 GFF4262 hypothetical protein -0.45
    7 GFF6175 hypothetical protein -0.43
    8 GFF4995 no description -0.41
    9 GFF2521 FIG00931781: hypothetical protein -0.41
    10 GFF125 Dihydroorotase (EC 3.5.2.3) -0.41
    11 GFF5971 hypothetical protein -0.40
    12 GFF160 hypothetical protein -0.40
    13 GFF6489 no description -0.40
    14 GFF5271 Transcriptional regulator, LysR family -0.40
    15 GFF3912 Ferrous iron transport permease EfeU -0.39
    16 GFF2827 Bacterioferritin (EC 1.16.3.1) -0.39
    17 GFF2793 Tricarboxylate transport protein TctC -0.39
    18 GFF5754 Flagellar cap protein FliD -0.39
    19 GFF1152 Lysine decarboxylase family -0.39
    20 GFF563 Type IV fimbrial biogenesis protein PilY1 -0.38

    Or look for positive cofitness