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  • Negative cofitness for GFF6583 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7355 1,2-phenylacetyl-CoA epoxidase, subunit A (EC 1.14.13.149) -0.54
    2 GFF4057 Copper/silver efflux RND transporter, membrane fusion protein CusB -0.54
    3 GFF4614 Transcriptional regulator, AraC family -0.52
    4 GFF3441 Hypothetical protein VC0266 (sugar utilization related?) -0.52
    5 GFF2443 Iron-sulfur cluster regulator IscR -0.51
    6 GFF4307 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.50
    7 GFF5737 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) -0.50
    8 GFF6335 no description -0.48
    9 GFF3180 FIG00348182: hypothetical protein -0.47
    10 GFF4816 FIG01074109: hypothetical protein -0.47
    11 GFF6822 Peptidase C14, caspase catalytic subunit p20 -0.47
    12 GFF5098 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-) -0.47
    13 GFF2820 ABC-type hemin transport system, ATPase component -0.47
    14 GFF6398 SH3, type 3 -0.47
    15 GFF2625 hypothetical protein -0.46
    16 GFF6446 Xaa-Pro aminopeptidase (EC 3.4.11.9) -0.45
    17 GFF5636 Molybdenum ABC transporter, substrate-binding protein ModA -0.45
    18 GFF3203 no description -0.45
    19 GFF6867 no description -0.45
    20 GFF5299 TonB-dependent receptor -0.45

    Or look for positive cofitness