Negative cofitness for GFF6579 from Variovorax sp. SCN45

Conjugative transfer protein TrbB
SEED: Conjugative transfer protein TrbB
KEGG: type IV secretion system protein VirB11

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF7358 Phenylacetate ABC transporter, permease protein 2 -0.61
2 GFF6239 Catalase KatE-intracellular protease (EC 1.11.1.6) -0.60
3 GFF420 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) -0.57
4 GFF1234 Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11) -0.57
5 GFF2652 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) -0.56
6 GFF5456 L-threonate/D-erythronate transcriptional regulator, GntR family -0.54
7 GFF6545 Uncharacterized MFS-type transporter -0.53
8 GFF4415 Conjugative transfer protein TrbC -0.53
9 GFF3807 FIG00538552: hypothetical protein -0.52
10 GFF7036 LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) -0.51
11 GFF5014 Acyl-CoA dehydrogenase -0.51
12 GFF6139 Serine/threonine kinase -0.49
13 GFF48 DNA double-strand break repair protein Mre11 -0.49
14 GFF3154 no description -0.49
15 GFF1171 Transcriptional regulator, AraC family -0.48
16 GFF3072 Putative transmembrane protein -0.48
17 GFF4375 FIG00463055: hypothetical protein -0.48
18 GFF6417 BUG/TctC family periplasmic protein -0.47
19 GFF5199 Galactofuranose ABC transporter, permease protein 2 -0.47
20 GFF1301 Peptide deformylase (EC 3.5.1.88) -0.47

Or look for positive cofitness