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  • Negative cofitness for GFF6576 from Variovorax sp. SCN45

    Conjugative transfer protein TrbE
    SEED: Conjugative transfer protein TrbE
    KEGG: type IV secretion system protein VirB4

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2492 BUG/TctC family periplasmic protein -0.52
    2 GFF4571 Acyl-CoA dehydrogenase family protein -0.52
    3 GFF5643 no description -0.51
    4 GFF60 GDP-L-fucose synthetase (EC 1.1.1.271) -0.50
    5 GFF3554 FIG01121542: hypothetical protein -0.50
    6 GFF4459 Acyl-CoA:1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) -0.50
    7 GFF6934 Universal stress protein family -0.50
    8 GFF5081 Amidohydrolase family protein -0.50
    9 GFF2363 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.52) -0.49
    10 GFF5196 L-arabinose ABC transporter, permease protein AraH -0.49
    11 GFF2110 no description -0.49
    12 GFF4502 Putative transmembrane protein -0.49
    13 GFF64 hypothetical protein -0.49
    14 GFF5993 putative membrane protein -0.48
    15 GFF6147 Phosphonoacetaldehyde dehydrogenase (NAD+) -0.48
    16 GFF4274 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases -0.48
    17 GFF6831 hypothetical protein -0.47
    18 GFF7303 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) -0.47
    19 GFF4496 Uncharacterized MFS-type transporter -0.47
    20 GFF5218 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) -0.47

    Or look for positive cofitness