Negative cofitness for GFF6571 from Variovorax sp. SCN45

Conjugative transfer protein TrbI
SEED: Conjugative transfer protein TrbI
KEGG: type IV secretion system protein VirB10

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF6160 Dehydrogenase molybdenum cofactor insertion protein, XdhC/CoxF family -0.61
2 GFF3135 no description -0.61
3 GFF4993 putative tetratricopeptide repeat family protein -0.58
4 GFF326 Polysaccharide deacetylase, caspase activity -0.56
5 GFF1040 Oxidoreductase, short-chain dehydrogenase/reductase family -0.54
6 GFF5684 3-ketoacyl-CoA thiolase (EC 2.3.1.16) -0.54
7 GFF361 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / Enoyl CoA hydratase (EC 4.2.1.17) -0.53
8 GFF7057 Uncharacterized protein conserved in bacteria -0.52
9 GFF1754 Nicel/Cobalt-specific TonB-dependent outer membrane receptor -0.52
10 GFF2683 Protein containing domains DUF404, DUF407 -0.52
11 GFF1452 Predicted gluconate TRAP family transporter, DctM subunit -0.51
12 GFF1264 Transcriptional regulator, Xre family -0.51
13 GFF6120 Exonuclease SbcC -0.51
14 GFF2436 no description -0.51
15 GFF1384 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) -0.51
16 GFF7346 Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS -0.50
17 GFF1956 Ser/Thr protein phosphatase family protein -0.50
18 GFF3698 ATP-dependent, 3'-5' DNA helicase with strand annealing activity -0.50
19 GFF4582 TRAP-type C4-dicarboxylate transport system, small permease component -0.50
20 GFF1397 TRAP-type C4-dicarboxylate transport system, large permease component -0.49

Or look for positive cofitness