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  • Negative cofitness for GFF6459 from Variovorax sp. SCN45

    Two-component transcriptional regulatory protein BasR/PmrA (activated by BasS/PmrB)
    SEED: Transcriptional regulatory protein basR/pmrA
    KEGG: two-component system, OmpR family, response regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4247 no description -0.60
    2 GFF5266 Transaldolase (EC 2.2.1.2) -0.58
    3 GFF5169 hypothetical protein -0.57
    4 GFF5150 Taurine ABC transporter, permease protein TauC -0.56
    5 GFF2194 Tol-Pal system peptidoglycan-associated lipoprotein PAL -0.55
    6 GFF4527 Transcriptional regulator, GntR family -0.54
    7 GFF4400 hypothetical protein -0.53
    8 GFF3444 BUG/TctC family periplasmic protein -0.53
    9 GFF907 Transcriptional regulator, LysR family -0.52
    10 GFF4661 no description -0.52
    11 GFF6950 Acetoacetyl-CoA reductase (EC 1.1.1.36) -0.52
    12 GFF5409 FIG00576366: hypothetical protein -0.51
    13 GFF3489 Transcriptional regulator, AcrR family -0.51
    14 GFF6822 Peptidase C14, caspase catalytic subunit p20 -0.51
    15 GFF6861 no description -0.50
    16 GFF5727 Methyl-accepting chemotaxis sensor/transducer protein -0.50
    17 GFF4307 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.50
    18 GFF2824 TonB-dependent hemin, ferrichrome receptor -0.49
    19 GFF5017 Translation initiation factor SUI1-related protein -0.49
    20 GFF6168 Na(+) H(+) antiporter subunit G -0.49

    Or look for positive cofitness