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  • Negative cofitness for GFF6454 from Variovorax sp. SCN45

    Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit
    SEED: Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit
    KEGG: gluconate 2-dehydrogenase gamma chain

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4302 hypothetical protein AF1210 -0.57
    2 GFF1863 Uncharacterized MFS-type transporter -0.56
    3 GFF1217 Transcriptional regulator RpiR in protein degradation cluster -0.56
    4 GFF5935 VgrG protein -0.56
    5 GFF6389 Amidohydrolase domain protein -0.55
    6 GFF5946 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA -0.54
    7 GFF498 Squalene/phytoene desaturase HopC -0.53
    8 GFF4996 no description -0.53
    9 GFF2640 PKHD-type hydroxylase YbiX -0.52
    10 GFF5281 Xylulose kinase (EC 2.7.1.17) -0.52
    11 GFF1569 BUG/TctC family periplasmic protein -0.50
    12 GFF3518 no description -0.50
    13 GFF3789 hypothetical protein -0.48
    14 GFF1369 Serine--glyoxylate aminotransferase (EC 2.6.1.45) -0.48
    15 GFF2692 hypothetical protein -0.47
    16 GFF3443 hypothetical protein -0.47
    17 GFF4523 Cytosine deaminase (EC 3.5.4.1) -0.46
    18 GFF4083 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) -0.46
    19 GFF6754 no description -0.46
    20 GFF6342 Mobile element protein -0.45

    Or look for positive cofitness