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  • Negative cofitness for GFF6427 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate)
    SEED: Tricarboxylate transport protein TctC

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4185 RNA polymerase ECF-type sigma factor -0.60
    2 GFF2263 putative membrane protein -0.55
    3 GFF4513 no description -0.53
    4 GFF2613 no description -0.53
    5 GFF7312 Phosphoglycerate mutase (EC 5.4.2.11) -0.53
    6 GFF4628 hypothetical protein -0.52
    7 GFF6681 TonB-dependent siderophore receptor -0.51
    8 GFF4117 Translation elongation factor Tu -0.51
    9 GFF3382 3-keto-5-aminohexanoate cleavage enzyme (EC 2.3.1.247) -0.51
    10 GFF6508 hypothetical protein -0.50
    11 GFF622 BUG/TctC family periplasmic protein -0.49
    12 GFF7103 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) -0.49
    13 GFF4353 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) -0.49
    14 GFF6156 Aerobic carbon monoxide dehydrogenase (quinone), medium chain (EC 1.2.5.3) -0.49
    15 GFF4642 no description -0.49
    16 GFF2182 Inner membrane component of TAM transport system -0.49
    17 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) -0.48
    18 GFF6465 hypothetical protein -0.48
    19 GFF785 Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system -0.48
    20 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family -0.48

    Or look for positive cofitness