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  • Negative cofitness for GFF6403 from Variovorax sp. SCN45

    Stresses-induced protein Ves (HutD)
    SEED: Conserved hypothetical protein (perhaps related to histidine degradation)
    KEGG: hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2253 no description -0.57
    2 GFF6300 CaiB/BaiF family protein -0.53
    3 GFF3865 Sigma factor RpoE negative regulatory protein RseB precursor -0.53
    4 GFF2167 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) -0.52
    5 GFF3231 hypothetical protein -0.51
    6 GFF2640 PKHD-type hydroxylase YbiX -0.49
    7 GFF496 Squalene synthase (EC 2.5.1.21) -0.49
    8 GFF7157 Peptidase M20D, amidohydrolase -0.48
    9 GFF1865 Transcriptional regulator, AraC family -0.47
    10 GFF5727 Methyl-accepting chemotaxis sensor/transducer protein -0.47
    11 GFF3022 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.47
    12 GFF4413 CopG domain-containing protein -0.47
    13 GFF502 Hydrolase -0.46
    14 GFF5699 Smr domain protein -0.45
    15 GFF6011 putative decarboxylase -0.45
    16 GFF5123 no description -0.45
    17 GFF4939 hypothetical protein -0.44
    18 GFF3050 Lactam utilization protein LamB -0.44
    19 GFF4588 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) -0.44
    20 GFF6928 Putative transmembrane protein -0.44

    Or look for positive cofitness