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  • Negative cofitness for GFF6397 from Variovorax sp. SCN45

    LysR family transcriptional regulator PA2758
    SEED: LysR family transcriptional regulator PA2758

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3814 OpgC protein -0.71
    2 GFF462 BUG/TctC family periplasmic protein -0.61
    3 GFF3205 no description -0.60
    4 GFF2649 putative autotransporter protein -0.59
    5 GFF6102 hypothetical protein -0.59
    6 GFF6106 Dienelactone hydrolase family protein -0.59
    7 GFF1728 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) -0.59
    8 GFF914 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.58
    9 GFF7372 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) -0.58
    10 GFF2653 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) -0.57
    11 GFF182 FIG00347566: hypothetical protein -0.57
    12 GFF4915 hypothetical protein -0.56
    13 GFF4897 Probable ALANIN-rich signal peptide protein -0.56
    14 GFF3665 no description -0.56
    15 GFF3717 Putative aminoacrylate peracid reductase RutC @ RidA/YER057c/UK114 superfamily protein -0.55
    16 GFF7373 CaiB/BaiF family protein -0.55
    17 GFF4090 Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) -0.55
    18 GFF7375 Arginine:pyruvate transaminase -0.55
    19 GFF4720 Putrescine transport system permease protein potI -0.54
    20 GFF6805 FIG00821908: hypothetical protein -0.54

    Or look for positive cofitness