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  • Negative cofitness for GFF6377 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: Extracellular ligand-binding receptor

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF420 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) -0.48
    2 GFF1171 Transcriptional regulator, AraC family -0.48
    3 GFF4415 Conjugative transfer protein TrbC -0.44
    4 GFF5500 hypothetical protein -0.43
    5 GFF5660 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing -0.43
    6 GFF6175 hypothetical protein -0.42
    7 GFF6431 hypothetical protein -0.42
    8 GFF3702 Beta-propeller domains of methanol dehydrogenase type -0.41
    9 GFF4033 no description -0.41
    10 GFF6667 hypothetical protein -0.40
    11 GFF794 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.40
    12 GFF1381 Peptidase M48, Ste24p -0.40
    13 GFF6569 no description -0.40
    14 GFF1954 no description -0.40
    15 GFF6931 no description -0.40
    16 GFF983 hypothetical protein -0.39
    17 GFF6487 Gfa-like protein -0.39
    18 GFF5229 Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3) -0.39
    19 GFF3725 RND efflux system, inner membrane transporter -0.38
    20 GFF6674 Predicted membrane protein -0.38

    Or look for positive cofitness