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  • Negative cofitness for GFF6371 from Variovorax sp. SCN45

    T6SS component TssC (ImpC/VipB)
    SEED: Uncharacterized protein ImpC
    KEGG: type VI secretion system protein ImpC

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6086 Putative short-chain dehydrogenase -0.55
    2 GFF2698 Transcriptional regulator, LysR family -0.53
    3 GFF3073 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) -0.51
    4 GFF2691 no description -0.50
    5 GFF875 no description -0.49
    6 GFF4987 3-fumarylpyruvate hydrolase (EC 3.7.1.20) -0.48
    7 GFF1407 hypothetical protein -0.48
    8 GFF1768 FIG00729359: hypothetical protein -0.46
    9 GFF7344 Transcriptional regulator, LysR family -0.46
    10 GFF4319 Oxidoreductase, short-chain dehydrogenase/reductase family -0.46
    11 GFF338 Chloramphenicol acetyltransferase (EC 2.3.1.28) -0.46
    12 GFF1149 FIG110192: hypothetical protein -0.46
    13 GFF756 no description -0.45
    14 GFF879 BUG/TctC family periplasmic protein -0.45
    15 GFF5859 KEGG: nickel transport system substrate-binding protein -0.45
    16 GFF1216 Isoaspartyl aminopeptidase (EC 3.4.19.5) @ Asp-X dipeptidase -0.44
    17 GFF3967 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) -0.44
    18 GFF7333 Transcriptional regulator, MerR family -0.44
    19 GFF6643 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.44
    20 GFF7314 no description -0.44

    Or look for positive cofitness