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  • Negative cofitness for GFF6365 from Variovorax sp. SCN45

    T6SS AAA+ chaperone ClpV (TssH)
    SEED: ClpB protein
    KEGG: type VI secretion system protein VasG

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6086 Putative short-chain dehydrogenase -0.58
    2 GFF5746 Flagellar protein FliJ -0.58
    3 GFF2054 RNA binding methyltransferase FtsJ like -0.57
    4 GFF5402 Transcriptional regulator, IclR family -0.56
    5 GFF6389 Amidohydrolase domain protein -0.56
    6 GFF2311 Putative PRS2 protein -0.55
    7 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family -0.50
    8 GFF2982 Histone acetyltransferase HPA2 and related acetyltransferases -0.50
    9 GFF4124 no description -0.49
    10 GFF1739 Glutamate carboxypeptidase (EC 3.4.17.11) -0.49
    11 GFF7322 hypothetical protein -0.49
    12 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) -0.49
    13 GFF5938 T6SS component TssF (ImpG/VasA) -0.48
    14 GFF1149 FIG110192: hypothetical protein -0.48
    15 GFF994 Cytoskeleton protein RodZ -0.48
    16 GFF6712 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) -0.48
    17 GFF6845 ATPase involved in DNA repair -0.47
    18 GFF6973 Mobile element protein -0.47
    19 GFF7011 Taurine ABC transporter, permease protein TauC -0.47
    20 GFF3967 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) -0.47

    Or look for positive cofitness