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  • Negative cofitness for GFF6353 from Variovorax sp. SCN45

    T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain
    SEED: Outer membrane protein ImpK/VasF, OmpA/MotB domain
    KEGG: type VI secretion system protein ImpK

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5221 Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) -0.61
    2 GFF3801 Response regulator receiver protein -0.55
    3 GFF1375 Transcriptional regulator, LysR family -0.54
    4 GFF4073 Copper tolerance protein -0.53
    5 GFF3997 Short-chain dehydrogenase/reductase SDR -0.52
    6 GFF7248 no description -0.51
    7 GFF6027 Nucleoside-diphosphate-sugar epimerases -0.49
    8 GFF3393 Benzoate ABC transporter, ATP-binding protein 2 -0.49
    9 GFF5611 BUG/TctC family periplasmic protein -0.48
    10 GFF7009 hypothetical protein -0.48
    11 GFF6134 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.48
    12 GFF2332 Transcriptional regulator, LysR family -0.47
    13 GFF6143 2-aminoethylphosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) -0.46
    14 GFF3188 hypothetical protein -0.46
    15 GFF7254 Mannonate dehydratase (EC 4.2.1.8) -0.46
    16 GFF3566 Transcriptional regulator, LysR family -0.45
    17 GFF2962 RND efflux system, membrane fusion protein -0.45
    18 GFF5854 Type I secretion system, outer membrane component LapE -0.45
    19 GFF7029 hypothetical protein -0.45
    20 GFF332 hypothetical protein -0.44

    Or look for positive cofitness