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  • Negative cofitness for GFF6352 from Variovorax sp. SCN45

    T6SS component TssM (IcmF/VasK)
    SEED: IcmF-related protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2650 hypothetical protein -0.54
    2 GFF4292 no description -0.54
    3 GFF348 Superoxide dismutase [Fe] (EC 1.15.1.1) -0.53
    4 GFF1458 no description -0.50
    5 GFF972 no description -0.49
    6 GFF955 N-acetylmuramoyl-L-alanine amidase, family 2 -0.49
    7 GFF4215 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 1 AapQ -0.49
    8 GFF701 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.49
    9 GFF7363 hypothetical protein -0.49
    10 GFF178 Mannonate dehydratase (EC 4.2.1.8) -0.49
    11 GFF6379 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.48
    12 GFF3267 RNA-binding protein -0.48
    13 GFF116 RidA/YER057c/UK114 superfamily, group 1 -0.48
    14 GFF3738 Uncharacterized protein YraP -0.48
    15 GFF3018 VgrG protein -0.47
    16 GFF1401 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily -0.47
    17 GFF405 3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) -0.47
    18 GFF1846 Nucleoside ABC transporter, permease protein 2 -0.47
    19 GFF3159 Sulfite dehydrogenase (quinone), molybdopterin-containing subunit SoeA (EC 1.8.5.6) -0.46
    20 GFF7077 no description -0.46

    Or look for positive cofitness