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  • Negative cofitness for GFF6350 from Variovorax sp. SCN45

    T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA
    SEED: Serine/threonine protein kinase (EC 2.7.11.1)
    KEGG: non-specific serine/threonine protein kinase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3267 RNA-binding protein -0.59
    2 GFF4215 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 1 AapQ -0.58
    3 GFF6974 no description -0.58
    4 GFF3559 no description -0.56
    5 GFF6626 ISPsy6, transposase -0.56
    6 GFF1028 FIG027190: Putative transmembrane protein -0.54
    7 GFF7270 Altronate dehydratase (EC 4.2.1.7) -0.52
    8 GFF1305 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.52
    9 GFF6906 Transcriptional regulator, MarR family -0.52
    10 GFF7059 Zinc uptake regulation protein Zur -0.52
    11 GFF3169 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.52
    12 GFF6011 putative decarboxylase -0.51
    13 GFF4584 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein -0.50
    14 GFF4650 Transcriptional regulator, PadR family -0.50
    15 GFF5013 Citronellyl-CoA dehydrogenase -0.50
    16 GFF5700 UPF0758 family protein -0.50
    17 GFF929 Transcriptional regulator, IclR family -0.49
    18 GFF4775 Broad-specificity amino acid ABC transporter, substrate-binding protein -0.48
    19 GFF3374 no description -0.48
    20 GFF2650 hypothetical protein -0.48

    Or look for positive cofitness