Negative cofitness for GFF6342 from Variovorax sp. SCN45

Mobile element protein

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF1925 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases -0.73
2 GFF5004 N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) -0.70
3 GFF418 Endonuclease III (EC 4.2.99.18) -0.63
4 GFF7419 hypothetical protein -0.61
5 GFF1885 Gluconate transporter family protein -0.59
6 GFF1648 Ligand-binding SRPBCC domain protein family -0.58
7 GFF5394 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.55
8 GFF6639 no description -0.55
9 GFF813 Transcriptional regulator PA0877, LysR family -0.54
10 GFF2114 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type -0.54
11 GFF3442 RidA/YER057c/UK114 superfamily protein -0.54
12 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 -0.54
13 GFF1641 Polyketide synthase modules and related proteins -0.53
14 GFF7181 no description -0.51
15 GFF4782 Pyridoxal-5'-phosphate-dependent enzyme beta superfamily (fold type II) -0.51
16 GFF175 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.51
17 GFF112 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.51
18 GFF4296 hypothetical protein -0.50
19 GFF3995 hypothetical protein -0.50
20 GFF6574 Conjugative transfer protein TrbL -0.49

Or look for positive cofitness