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  • Negative cofitness for GFF6340 from Variovorax sp. SCN45

    no description

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1279 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.57
    2 GFF7004 Flagellar biosynthesis protein FlhA -0.49
    3 GFF1343 macromolecule metabolism; macromolecule degradation; degradation of proteins, peptides, glycopeptides -0.45
    4 GFF4544 RNA polymerase sigma factor RpoE -0.45
    5 GFF1660 Type IV fimbrial biogenesis protein PilY1 -0.44
    6 GFF7186 NAD-dependent protein deacetylase of SIR2 family -0.42
    7 GFF843 no description -0.42
    8 GFF4489 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) -0.42
    9 GFF1635 Polyketide synthase modules and related proteins -0.42
    10 GFF6860 Epoxide hydrolase (EC 3.3.2.9) -0.42
    11 GFF969 ATP-dependent protease HslVU (ClpYQ), peptidase subunit -0.41
    12 GFF4804 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE -0.41
    13 GFF4424 FIG00956188: hypothetical protein -0.41
    14 GFF4996 no description -0.40
    15 GFF1828 phosphodiesterase I -0.40
    16 GFF3217 hypothetical protein -0.39
    17 GFF1686 Uncharacterized protein Bsu YraM -0.39
    18 GFF6395 hypothetical protein -0.38
    19 GFF3313 Response regulator CreB of two-component signal transduction system CreBC -0.38
    20 GFF1897 Two-component system sensor histidine kinase/response regulator hybrid -0.38

    Or look for positive cofitness