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  • Negative cofitness for GFF628 from Variovorax sp. SCN45

    hypothetical protein
    KEGG: two-component system, OmpR family, response regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3000 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) -0.57
    2 GFF1567 Demethylmenaquinone methyltransferase-like protein -0.54
    3 GFF1375 Transcriptional regulator, LysR family -0.54
    4 GFF4598 Efflux ABC transporter, permease/ATP-binding protein mlr7818 -0.53
    5 GFF1790 Hydroxymethylpyrimidine ABC transporter, ATPase component -0.52
    6 GFF4918 hypothetical protein -0.51
    7 GFF3789 hypothetical protein -0.50
    8 GFF6368 T6SS lysozyme-like component TssE -0.49
    9 GFF6066 Quinone oxidoreductase (EC 1.6.5.5) -0.49
    10 GFF3058 Demethylmenaquinone methyltransferase-like protein -0.49
    11 GFF4162 Aldehyde dehydrogenase B (EC 1.2.1.22) -0.49
    12 GFF7256 Dehydratase, IlvD/Edd family -0.48
    13 GFF926 Transcriptional regulator, AcrR family -0.48
    14 GFF1878 Bll6165 protein -0.48
    15 GFF1508 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.47
    16 GFF69 Two-component transcriptional response regulator, LuxR family -0.47
    17 GFF6754 no description -0.47
    18 GFF5833 Oxidoreductase, short-chain dehydrogenase/reductase family -0.47
    19 GFF4288 Acyl-CoA dehydrogenase -0.46
    20 GFF317 Acyl carrier protein -0.46

    Or look for positive cofitness