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  • Negative cofitness for GFF6252 from Variovorax sp. SCN45

    Phosphonate ABC transporter permease protein PhnE (TC 3.A.1.9.1)
    SEED: Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1)
    KEGG: phosphonate transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5983 Transcriptional regulator, LysR family -0.56
    2 GFF5976 Transcriptional regulator, AraC family -0.51
    3 GFF2901 FIG00347713: hypothetical protein -0.50
    4 GFF3487 InterPro IPR005806 COGs COG2146 -0.50
    5 GFF4366 BUG/TctC family periplasmic protein -0.48
    6 GFF3556 BUG/TctC family periplasmic protein -0.47
    7 GFF6684 ABC transporter, ATP-binding protein -0.47
    8 GFF3655 no description -0.46
    9 GFF6094 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) -0.46
    10 GFF6045 FIG00932121: hypothetical protein -0.46
    11 GFF1817 5-hydroxyisourate hydrolase (EC 3.5.2.17) -0.46
    12 GFF3315 Cu(I)-responsive transcriptional regulator -0.46
    13 GFF5310 Cytochrome c4 -0.46
    14 GFF2597 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) -0.46
    15 GFF4564 hypothetical protein -0.45
    16 GFF5961 Acetyltransferase -0.45
    17 GFF828 CobW GTPase involved in cobalt insertion for B12 biosynthesis -0.44
    18 GFF3984 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) -0.44
    19 GFF6403 Stresses-induced protein Ves (HutD) -0.43
    20 GFF536 no description -0.43

    Or look for positive cofitness