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  • Negative cofitness for GFF6243 from Variovorax sp. SCN45

    Ku domain protein
    SEED: Ku domain protein
    KEGG: DNA end-binding protein Ku

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3704 FIG00536957: hypothetical protein -0.61
    2 GFF3544 no description -0.58
    3 GFF4010 no description -0.56
    4 GFF3012 T6SS component TssC (ImpC/VipB) -0.55
    5 GFF1208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) -0.54
    6 GFF4378 HYPOTHETICAL/UNKNOWN PROTEIN -0.54
    7 GFF2317 FIG015287: Zinc protease -0.53
    8 GFF5232 5'-nucleotidase (EC 3.1.3.5) -0.53
    9 GFF6654 Transcriptional regulator, RpiR family -0.52
    10 GFF3542 hypothetical protein -0.52
    11 GFF4617 2-keto-3-deoxy-L-fuconate dehydrogenase -0.52
    12 GFF2308 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center -0.52
    13 GFF5095 hypothetical protein -0.51
    14 GFF3272 Inner membrane protein, KefB/KefC family -0.51
    15 GFF881 Transcriptional regulator ligR, LysR family -0.51
    16 GFF1326 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) -0.51
    17 GFF441 no description -0.51
    18 GFF4144 Prolyl endopeptidase (EC 3.4.21.26) -0.50
    19 GFF764 hypothetical protein -0.50
    20 GFF3522 no description -0.49

    Or look for positive cofitness