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  • Negative cofitness for GFF6167 from Variovorax sp. SCN45

    Hydroxymethylpyrimidine ABC transporter, substrate-binding component
    SEED: Hydroxymethylpyrimidine ABC transporter, substrate-binding component

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4216 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.62
    2 GFF4038 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family -0.61
    3 GFF4659 no description -0.57
    4 GFF4179 hypothetical protein -0.56
    5 GFF17 hypothetical protein -0.56
    6 GFF6175 hypothetical protein -0.55
    7 GFF1418 Transcriptional regulator, LysR family -0.55
    8 GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) -0.55
    9 GFF4541 Uncharacterized protein conserved in bacteria -0.54
    10 GFF5078 Uncharacterized protein CbuG_0353 -0.54
    11 GFF407 no description -0.53
    12 GFF3219 hypothetical protein -0.53
    13 GFF1524 FIG006045: Sigma factor, ECF subfamily -0.52
    14 GFF6666 Transcriptional regulator protein -0.51
    15 GFF4851 Coupling protein VirD4, ATPase required for T-DNA transfer -0.51
    16 GFF5990 RND efflux system, inner membrane transporter -0.50
    17 GFF6489 no description -0.50
    18 GFF556 no description -0.50
    19 GFF2173 no description -0.49
    20 GFF3705 Amidases related to nicotinamidase -0.49

    Or look for positive cofitness