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  • Negative cofitness for GFF6122 from Variovorax sp. SCN45

    ABC-type antimicrobial peptide transport system, permease component
    SEED: ABC-type antimicrobial peptide transport system, permease component

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5469 Hydroxymethylpyrimidine ABC transporter, transmembrane component -0.62
    2 GFF6082 MoxR-like ATPase in aerotolerance operon -0.59
    3 GFF3759 Uridine kinase family protein YggC homolog -0.58
    4 GFF7342 Oxidoreductase -0.56
    5 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) -0.55
    6 GFF4015 KEGG: lactoylglutathione lyase -0.55
    7 GFF5035 Opine oxidase subunit A -0.55
    8 GFF2286 BUG/TctC family periplasmic protein -0.54
    9 GFF4401 no description -0.54
    10 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) -0.53
    11 GFF2106 hypothetical protein -0.53
    12 GFF4404 Mobile element protein -0.52
    13 GFF6324 Kup system potassium uptake protein -0.50
    14 GFF4245 Cytochrome c peroxidase (EC 1.11.1.5) -0.50
    15 GFF1119 Ribonuclease HI (EC 3.1.26.4) -0.49
    16 GFF1111 probable membrane protein NMA1176 -0.48
    17 GFF5036 Opine oxidase subunit B -0.48
    18 GFF1738 Uncharacterized proteins YbdD and YjiX -0.48
    19 GFF6247 ApaG protein -0.48
    20 GFF139 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) -0.47

    Or look for positive cofitness