Negative cofitness for GFF6088 from Variovorax sp. SCN45

Phenylacetic acid degradation protein PaaY
SEED: Phenylacetic acid degradation protein PaaY
KEGG: carnitine operon protein CaiE

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF2294 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy -0.61
2 GFF690 Transcriptional regulator, IclR family -0.61
3 GFF2365 Altronate dehydratase (EC 4.2.1.7) -0.61
4 GFF591 Renalase (EC 1.6.3.5), oxidases 1,2-dihydro- and 1,6-dihydro- beta-NAD(P)H isomers back to NAD(P) -0.57
5 GFF3227 no description -0.57
6 GFF3904 Probable signal peptide protein -0.55
7 GFF1048 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme -0.55
8 GFF6213 Ornithine cyclodeaminase (EC 4.3.1.12) -0.55
9 GFF4593 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) -0.54
10 GFF856 no description -0.54
11 GFF4944 Excinuclease ABC subunit A -0.53
12 GFF6696 Ubiquinol-cytochrome C reductase, cytochrome C1 subunit -0.53
13 GFF3114 Methionine ABC transporter ATP-binding protein -0.53
14 GFF7245 universal stress protein, UspA family -0.53
15 GFF365 Acyl-CoA dehydrogenase -0.52
16 GFF5451 Membrane-bound lytic murein transglycosylase A -0.52
17 GFF4632 Glycosyl transferase, family 2 -0.52
18 GFF7377 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) -0.52
19 GFF5676 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) -0.52
20 GFF3848 Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C -0.52

Or look for positive cofitness