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  • Negative cofitness for GFF6077 from Variovorax sp. SCN45

    G:T/U mismatch-specific uracil/thymine DNA-glycosylase (EC 3.2.2.27)
    SEED: G:T/U mismatch-specific uracil/thymine DNA-glycosylase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2634 FIG00464095: hypothetical protein -0.63
    2 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) -0.63
    3 GFF4893 FIG00640418: hypothetical protein -0.62
    4 GFF766 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) -0.62
    5 GFF5323 Type IV pilus biogenesis protein PilQ -0.60
    6 GFF5416 Type IV fimbrial biogenesis protein PilW -0.59
    7 GFF5412 no description -0.59
    8 GFF3825 Autolysin sensor kinase (EC 2.7.3.-) -0.59
    9 GFF3068 FIG00538108: hypothetical protein -0.59
    10 GFF5322 Type IV pilus biogenesis protein PilP -0.59
    11 GFF3886 Putative transmembrane protein -0.59
    12 GFF993 Type IV pilus biogenesis protein PilF -0.58
    13 GFF4432 Two-component system response regulator protein -0.58
    14 GFF5418 Type IV fimbrial biogenesis protein PilY1 -0.58
    15 GFF5320 Type IV pilus biogenesis protein PilN -0.58
    16 GFF5319 Type IV pilus biogenesis protein PilM -0.58
    17 GFF362 Enoyl-CoA hydratase (EC 4.2.1.17) -0.58
    18 GFF5490 Uncharacterized protein with LysM domain, COG1652 -0.58
    19 GFF4977 Transcriptional regulator for ferulate or vanillate catabolism -0.57
    20 GFF2509 Type IV fimbrial assembly protein PilC -0.57

    Or look for positive cofitness