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  • Negative cofitness for GFF6059 from Variovorax sp. SCN45

    ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron)
    SEED: ABC transporter permease protein
    KEGG: putative spermidine/putrescine transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2634 FIG00464095: hypothetical protein -0.53
    2 GFF4650 Transcriptional regulator, PadR family -0.52
    3 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) -0.50
    4 GFF6461 Thioesterase superfamily -0.49
    5 GFF1841 Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) -0.49
    6 GFF6268 BUG/TctC family periplasmic protein -0.49
    7 GFF683 Transcriptional regulator, LysR family -0.48
    8 GFF2584 Sulfate permease -0.48
    9 GFF1612 no description -0.48
    10 GFF5786 Transcriptional regulator, LuxR family -0.48
    11 GFF3147 hypothetical protein -0.48
    12 GFF4911 Nudix-like NDP and NTP phosphohydrolase NudJ -0.48
    13 GFF2219 FIG00454641: hypothetical protein -0.48
    14 GFF3813 no description -0.47
    15 GFF1936 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) -0.47
    16 GFF216 Transmembrane regulator protein PrtR -0.47
    17 GFF5955 Transcriptional regulator, LysR family -0.47
    18 GFF5805 Putative transmembrane protein -0.46
    19 GFF4701 Various polyols ABC transporter, permease protein 2 -0.45
    20 GFF1623 Glycerol-3-phosphate transporter -0.44

    Or look for positive cofitness