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  • Negative cofitness for GFF6043 from Variovorax sp. SCN45

    tRNA/rRNA cytosine-C5-methylase
    SEED: Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p; tRNA and rRNA cytosine-C5-methylases
    KEGG: ribosomal RNA small subunit methyltransferase B

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4252 hypothetical protein -0.70
    2 GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B -0.65
    3 GFF7146 Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster -0.62
    4 GFF5356 Aldose 1-epimerase -0.61
    5 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) -0.61
    6 GFF5870 hypothetical protein -0.60
    7 GFF5680 Phosphoglycolate phosphatase (EC 3.1.3.18) -0.60
    8 GFF338 Chloramphenicol acetyltransferase (EC 2.3.1.28) -0.60
    9 GFF5394 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.59
    10 GFF318 Uncharacterized protein YjgR -0.59
    11 GFF6411 Histidine ABC transporter, ATP-binding protein -0.58
    12 GFF3511 no description -0.58
    13 GFF1461 Enoyl-CoA hydratase (EC 4.2.1.17) -0.58
    14 GFF7375 Arginine:pyruvate transaminase -0.57
    15 GFF5409 FIG00576366: hypothetical protein -0.57
    16 GFF4397 hypothetical protein -0.57
    17 GFF3385 Flavin-containing monooxygenase -0.56
    18 GFF4799 hypothetical protein -0.55
    19 GFF4726 hypothetical protein -0.55
    20 GFF1345 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) -0.55

    Or look for positive cofitness