Negative cofitness for GFF604 from Variovorax sp. SCN45

Tricarballylate utilization protein, TcuB
SEED: TcuB: works with TcuA to oxidize tricarballylate to cis-aconitate
KEGG: citrate/tricarballylate utilization protein

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF7272 D-glucarate permease -0.57
2 GFF6978 no description -0.54
3 GFF4404 Mobile element protein -0.52
4 GFF6627 Mobile element protein -0.50
5 GFF5238 General secretion pathway protein L -0.49
6 GFF2311 Putative PRS2 protein -0.48
7 GFF2464 Sensory histidine kinase BaeS -0.48
8 GFF7116 2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39) -0.47
9 GFF5402 Transcriptional regulator, IclR family -0.46
10 GFF2536 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) -0.46
11 GFF3849 Iron-sulfur cluster-binding protein, Rieske family -0.46
12 GFF6115 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.46
13 GFF5674 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion -0.45
14 GFF2535 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) -0.45
15 GFF4240 Integral membrane protein -0.45
16 GFF5469 Hydroxymethylpyrimidine ABC transporter, transmembrane component -0.44
17 GFF4117 Translation elongation factor Tu -0.44
18 GFF1348 Oxidoreductase, short-chain dehydrogenase/reductase family -0.44
19 GFF5994 Chlorogenate esterase -0.44
20 GFF876 hypothetical protein -0.43

Or look for positive cofitness