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  • Negative cofitness for GFF603 from Variovorax sp. SCN45

    Tricarballylate dehydrogenase, TcuA
    SEED: TcuA: flavoprotein used to oxidize tricarballylate to cis-aconitate
    KEGG: tricarballylate dehydrogenase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7214 Peptidase M20D, amidohydrolase -0.58
    2 GFF629 hypothetical protein -0.55
    3 GFF3409 Probable lipoprotein signal peptide -0.55
    4 GFF736 hypothetical protein -0.54
    5 GFF3694 Phosphoesterase, PA-phosphatase related -0.53
    6 GFF871 Vitamin B12 ABC transporter, substrate-binding protein BtuF -0.52
    7 GFF6429 Pyruvate:Oxaloacetate transcarboxylase domain protein -0.52
    8 GFF1632 RNA polymerase ECF-type sigma factor -0.52
    9 GFF2159 Pyrimidine operon regulatory protein PyrR -0.50
    10 GFF6814 NADH dehydrogenase (EC 1.6.99.3) -0.50
    11 GFF6138 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6 -0.50
    12 GFF3238 no description -0.50
    13 GFF1423 Phenylacetate ABC transporter, permease protein 1 -0.50
    14 GFF7412 no description -0.50
    15 GFF1377 Phosphohydrolase (MutT/nudix family protein) -0.49
    16 GFF5245 FIG00771430: hypothetical protein -0.49
    17 GFF536 no description -0.48
    18 GFF3203 no description -0.48
    19 GFF5517 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) -0.48
    20 GFF281 Outer membrane porin protein 32 precursor -0.48

    Or look for positive cofitness