• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF6019 from Variovorax sp. SCN45

    Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2)
    SEED: Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2)
    KEGG: prolyl 4-hydroxylase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5143 no description -0.58
    2 GFF6324 Kup system potassium uptake protein -0.56
    3 GFF1097 Phosphate regulon transcriptional regulatory protein PhoB (SphR) -0.54
    4 GFF5035 Opine oxidase subunit A -0.52
    5 GFF7172 Manganese transport protein MntH -0.52
    6 GFF573 Valine--pyruvate aminotransferase (EC 2.6.1.66) -0.50
    7 GFF1134 FIG00931167: hypothetical protein -0.50
    8 GFF4878 putative lipoprotein -0.49
    9 GFF2196 no description -0.49
    10 GFF1665 Nicotinamidase/isochorismatase family protein -0.48
    11 GFF1598 no description -0.48
    12 GFF640 no description -0.48
    13 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) -0.48
    14 GFF6456 Lipid A phosphoethanolamine transferase, putative -0.48
    15 GFF2390 no description -0.48
    16 GFF3471 hypothetical protein -0.47
    17 GFF6014 Transcriptional regulator, LysR family -0.47
    18 GFF4145 transcriptional regulators-like protein -0.47
    19 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) -0.47
    20 GFF7222 Coenzyme F390 synthetase -0.46

    Or look for positive cofitness