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  • Negative cofitness for GFF6016 from Variovorax sp. SCN45

    Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
    SEED: Short-chain dehydrogenase/reductase SDR

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3710 Lactoylglutathione lyase and related lyases -0.54
    2 GFF5785 FIG00931285: hypothetical protein -0.51
    3 GFF6301 Pyruvate:Oxaloacetate transcarboxylase domain protein -0.51
    4 GFF2862 FIG01199081: hypothetical protein -0.50
    5 GFF162 hypothetical protein -0.50
    6 GFF3697 ATP-dependent DNA ligase (EC 6.5.1.1) LigC -0.49
    7 GFF7092 no description -0.48
    8 GFF2952 Arsenic resistance protein ArsH -0.48
    9 GFF7181 no description -0.47
    10 GFF7193 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) -0.47
    11 GFF5015 Putative stomatin/prohibitin-family membrane protease subunit aq_911 -0.47
    12 GFF6069 Permease of the drug/metabolite transporter (DMT) superfamily -0.47
    13 GFF3191 no description -0.47
    14 GFF5239 hypothetical protein -0.47
    15 GFF1842 Transcriptional regulator, LysR family -0.47
    16 GFF4799 hypothetical protein -0.46
    17 GFF5029 Transcriptional regulator, IclR family -0.46
    18 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) -0.46
    19 GFF1643 MbtH-like NRPS chaperone -0.45
    20 GFF3283 ClpB protein -0.45

    Or look for positive cofitness