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  • Negative cofitness for GFF5990 from Variovorax sp. SCN45

    RND efflux system, inner membrane transporter
    SEED: RND efflux system, inner membrane transporter CmeB
    KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4158 hypothetical protein -0.55
    2 GFF4084 hypothetical protein -0.53
    3 GFF3401 P-hydroxylaminobenzoate lyase -0.52
    4 GFF5643 no description -0.51
    5 GFF5793 Low-affinity inorganic phosphate transporter -0.50
    6 GFF6167 Hydroxymethylpyrimidine ABC transporter, substrate-binding component -0.50
    7 GFF5655 Formate dehydrogenase formation protein FdhE -0.50
    8 GFF2631 Transcriptional regulator, ArsR family -0.50
    9 GFF909 Alcohol dehydrogenase (EC 1.1.1.1) -0.49
    10 GFF3352 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) -0.49
    11 GFF1365 no description -0.49
    12 GFF3475 Gate supefamily SpmA/SpmB domains protein -0.49
    13 GFF3968 Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8) -0.48
    14 GFF6086 Putative short-chain dehydrogenase -0.47
    15 GFF1777 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily -0.46
    16 GFF1825 Mg(2+) transport ATPase, P-type (EC 3.6.3.2) -0.46
    17 GFF3146 no description -0.46
    18 GFF4841 Conjugative transfer protein TrbI -0.45
    19 GFF1491 Gluconolactonase -0.45
    20 GFF80 no description -0.44

    Or look for positive cofitness