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  • Negative cofitness for GFF5989 from Variovorax sp. SCN45

    RND efflux system, membrane fusion protein
    SEED: RND efflux system, membrane fusion protein CmeA
    KEGG: membrane fusion protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3071 ADP-ribose pyrophosphatase of COG1058 family (EC 3.6.1.13) -0.65
    2 GFF3166 Transcriptional regulator, IclR family -0.61
    3 GFF3525 Protein tyrosine/serine phosphatase -0.60
    4 GFF4171 hypothetical protein -0.59
    5 GFF5272 Various polyols ABC transporter, substrate-binding protein -0.58
    6 GFF5769 Chemotaxis response - phosphatase CheZ -0.54
    7 GFF7080 no description -0.54
    8 GFF3518 no description -0.53
    9 GFF2872 Cell division protein FtsL -0.53
    10 GFF1795 Hydantoin racemase (EC 5.1.99.5) -0.52
    11 GFF1086 putative Glutathione-regulated potassium-efflux system protein KefB -0.51
    12 GFF6683 Efflux ABC transporter, permease protein -0.49
    13 GFF1476 hypothetical protein -0.48
    14 GFF5367 GTP cyclohydrolase 1 type 2 homolog YbgI -0.47
    15 GFF1961 Prephenate dehydratase (EC 4.2.1.51) @ Arogenate dehydratase (EC 4.2.1.91) -0.47
    16 GFF6530 Type I secretion outer membrane protein, TolC family -0.46
    17 GFF4887 FIG00582580: hypothetical protein -0.46
    18 GFF7255 BUG/TctC family periplasmic protein -0.46
    19 GFF2284 FIG00538168: hypothetical protein -0.46
    20 GFF1145 hypothetical protein -0.46

    Or look for positive cofitness