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  • Negative cofitness for GFF5948 from Variovorax sp. SCN45

    hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3885 tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) -0.61
    2 GFF417 Aspartate aminotransferase (AspB-4) (EC 2.6.1.1) -0.60
    3 GFF2842 RNA polymerase sigma factor RpoS -0.60
    4 GFF5539 Transporter, LysE family -0.59
    5 GFF316 Transmembrane protein -0.57
    6 GFF2270 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein -0.57
    7 GFF5974 hypothetical protein -0.56
    8 GFF5373 Xylose isomerase-like TIM-barrel protein KPN_00539 -0.55
    9 GFF2427 Transcriptional regulator, MarR family -0.55
    10 GFF1738 Uncharacterized proteins YbdD and YjiX -0.55
    11 GFF1453 TRAP-type C4-dicarboxylate transport system, periplasmic component -0.54
    12 GFF2499 ATP/GTP-binding protein -0.54
    13 GFF3872 DNA recombination and repair protein RecO -0.53
    14 GFF4384 Plasmid replication initiator protein -0.53
    15 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) -0.53
    16 GFF2144 tRNA-dihydrouridine synthase DusB -0.52
    17 GFF1111 probable membrane protein NMA1176 -0.52
    18 GFF6398 SH3, type 3 -0.52
    19 GFF4465 Transcriptional regulator, LysR family -0.52
    20 GFF1142 Efflux transport system, outer membrane factor (OMF) lipoprotein -0.52

    Or look for positive cofitness