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  • Negative cofitness for GFF5946 from Variovorax sp. SCN45

    T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA
    SEED: serine/threonine protein kinase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2839 Protein GlcG -0.68
    2 GFF2776 hypothetical protein -0.62
    3 GFF6313 Enoyl-CoA hydratase (EC 4.2.1.17) -0.62
    4 GFF5776 Gluconokinase (EC 2.7.1.12) -0.59
    5 GFF414 Malate dehydrogenase (EC 1.1.1.37) -0.59
    6 GFF3362 Fatty acid desaturase -0.56
    7 GFF5135 DNA repair exonuclease family protein YhaO -0.55
    8 GFF6454 Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit -0.54
    9 GFF6486 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) -0.54
    10 GFF234 Protein QmcA (possibly involved in integral membrane quality control) -0.52
    11 GFF5817 Two-component system sensor histidine kinase -0.52
    12 GFF3760 putative lipoprotein -0.51
    13 GFF6115 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.49
    14 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake -0.49
    15 GFF2469 hypothetical protein -0.49
    16 GFF245 Aspartate aminotransferase (EC 2.6.1.1) -0.48
    17 GFF6491 SAM-dependent methyltransferase -0.48
    18 GFF4256 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) -0.47
    19 GFF3827 UPF0118 membrane protein SMc00793 -0.47
    20 GFF4910 hypothetical protein -0.47

    Or look for positive cofitness