Negative cofitness for GFF5940 from Variovorax sp. SCN45

T6SS associated component TagJ (ImpE)
SEED: Protein of avirulence locus ImpE
KEGG: type VI secretion system protein ImpE

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF4967 Glutathione S-transferase family protein -0.65
2 GFF6334 no description -0.57
3 GFF1924 Aliphatic sulfonate monooxygenase family, FMNH2- or F420-dependent -0.56
4 GFF1338 ABC transporter, permease protein 1 RSc1751 -0.55
5 GFF2283 Enoyl-CoA hydratase (EC 4.2.1.17) -0.55
6 GFF582 Two-component system sensor histidine kinase -0.55
7 GFF5198 ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose) -0.55
8 GFF2658 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) -0.54
9 GFF2239 no description -0.54
10 GFF856 no description -0.54
11 GFF303 Probable transcriptional regulatory protein YebC -0.54
12 GFF3227 no description -0.54
13 GFF4214 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 2 AapM -0.54
14 GFF1048 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme -0.53
15 GFF4332 Aldehyde dehydrogenase (EC 1.2.1.3) -0.53
16 GFF2097 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) -0.53
17 GFF181 Protein of unknown function (DUF1501) -0.52
18 GFF2273 Transcriptional regulator, AcrR family -0.52
19 GFF3529 Nicotinamide-nucleotide adenylyltransferase, NadM family (EC 2.7.7.1) / ADP-ribose pyrophosphatase (EC 3.6.1.13) -0.52
20 GFF1375 Transcriptional regulator, LysR family -0.52

Or look for positive cofitness