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  • Negative cofitness for GFF5918 from Variovorax sp. SCN45

    T6SS component TssC (ImpC/VipB)
    SEED: Uncharacterized protein ImpC
    KEGG: type VI secretion system protein ImpC

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5626 Patatin -0.53
    2 GFF7086 Transcriptional regulator, IclR family -0.52
    3 GFF1037 putative membrane protein -0.50
    4 GFF4197 Transcriptional regulator, LysR family -0.50
    5 GFF959 Phage holin -0.49
    6 GFF6659 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) -0.49
    7 GFF6072 Transcriptional regulator, LysR family -0.49
    8 GFF6517 Cation transport protein ChaC -0.48
    9 GFF6673 Membrane protein -0.47
    10 GFF2555 FIG00932538: hypothetical protein -0.47
    11 GFF6844 Putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor associated with VreARI signaling system -0.47
    12 GFF2741 FIG002207: Probable transmembrane protein -0.47
    13 GFF1539 RsbT co-antagonist protein RsbRA -0.47
    14 GFF5314 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ -0.47
    15 GFF6560 no description -0.47
    16 GFF472 hypothetical protein -0.47
    17 GFF1370 Transcriptional regulator associated with Tricarboxylic transport -0.46
    18 GFF6973 Mobile element protein -0.46
    19 GFF7386 no description -0.46
    20 GFF2983 Transcriptional regulator YfeR, LysR family -0.45

    Or look for positive cofitness