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  • Negative cofitness for GFF5915 from Variovorax sp. SCN45

    T6SS secretion lipoprotein TssJ (VasD)
    SEED: Type VI secretion lipoprotein/VasD
    KEGG: type VI secretion system protein VasD

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6156 Aerobic carbon monoxide dehydrogenase (quinone), medium chain (EC 1.2.5.3) -0.45
    2 GFF7290 Putative transmembrane protein -0.45
    3 GFF4993 putative tetratricopeptide repeat family protein -0.45
    4 GFF4380 Transcriptional regulator, Xre family -0.45
    5 GFF7264 Gluconolactonase (EC 3.1.1.17) -0.44
    6 GFF282 hypothetical protein -0.43
    7 GFF4982 Thiol:disulfide interchange protein DsbC -0.43
    8 GFF3823 FIG00581576: hypothetical protein -0.43
    9 GFF3111 hypothetical protein -0.43
    10 GFF4663 no description -0.42
    11 GFF2435 FIG138928: iron-regulated membrane protein -0.42
    12 GFF1686 Uncharacterized protein Bsu YraM -0.40
    13 GFF2313 Two-component system sensor histidine kinase -0.40
    14 GFF4884 UPF0380 proteins YafZ and homologs -0.40
    15 GFF4396 Mobile element protein -0.39
    16 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) -0.39
    17 GFF6332 Maltodextrin glucosidase (EC 3.2.1.20) -0.39
    18 GFF2119 Type IV fimbrial biogenesis protein PilW -0.39
    19 GFF1178 hypothetical protein -0.39
    20 GFF7240 Polyhydroxyalkanoic acid synthase -0.39

    Or look for positive cofitness