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  • Negative cofitness for GFF5878 from Variovorax sp. SCN45

    16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176)
    SEED: Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)
    KEGG: ribosomal RNA small subunit methyltransferase B

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6398 SH3, type 3 -0.72
    2 GFF6555 no description -0.63
    3 GFF4307 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.60
    4 GFF4858 Transposase -0.58
    5 GFF6795 similar to puromycin N-acetyltransferase -0.55
    6 GFF5161 Glutathione S-transferase (EC 2.5.1.18) -0.55
    7 GFF3373 Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) -0.55
    8 GFF4614 Transcriptional regulator, AraC family -0.55
    9 GFF3300 hypothetical protein -0.55
    10 GFF5857 Fe2+-dicitrate sensor, membrane component -0.54
    11 GFF3103 Cys-tRNA(Pro) deacylase YbaK -0.52
    12 GFF6446 Xaa-Pro aminopeptidase (EC 3.4.11.9) -0.52
    13 GFF6757 no description -0.52
    14 GFF6120 Exonuclease SbcC -0.52
    15 GFF7062 probable carboxylesterase -0.52
    16 GFF3149 RND efflux system, inner membrane transporter -0.51
    17 GFF3379 Aromatic--CoA ligase -0.50
    18 GFF1083 no description -0.50
    19 GFF615 beta-glucosidase (EC 3.2.1.21) -0.49
    20 GFF7348 Oxidoreductase, aldo/keto reductase family -0.49

    Or look for positive cofitness