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  • Negative cofitness for GFF5862 from Variovorax sp. SCN45

    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2474 Two-component transcriptional response regulator SMc02366, LuxR family -0.63
    2 GFF6107 Zinc transporter, ZIP family -0.63
    3 GFF108 General secretion pathway protein G -0.62
    4 GFF4943 Chloride channel protein -0.62
    5 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) -0.60
    6 GFF126 Repressor homolog -0.60
    7 GFF3162 Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) -0.60
    8 GFF1191 Predicted hydroxymethylpyrimidine transporter CytX -0.59
    9 GFF3404 Benzoyl-CoA-dihydrodiol lyase (EC 4.1.2.44) -0.59
    10 GFF1627 ABC-type siderophore export system, fused ATPase and permease components -0.59
    11 GFF4650 Transcriptional regulator, PadR family -0.59
    12 GFF5390 RecA protein -0.59
    13 GFF1096 Phosphate transport system regulatory protein PhoU -0.58
    14 GFF2441 RND efflux system, inner membrane transporter -0.57
    15 GFF2111 Permease of the drug/metabolite transporter (DMT) superfamily -0.57
    16 GFF4821 Transcriptional regulator, AcrR family -0.57
    17 GFF1612 no description -0.57
    18 GFF216 Transmembrane regulator protein PrtR -0.56
    19 GFF2987 CBS domain protein -0.56
    20 GFF7043 Putative transmembrane protein -0.56

    Or look for positive cofitness