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  • Negative cofitness for GFF5860 from Variovorax sp. SCN45

    no description

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3743 Twitching motility protein PilT -0.77
    2 GFF4439 Probable transmembrane protein -0.74
    3 GFF3886 Putative transmembrane protein -0.72
    4 GFF2153 type IV pili signal transduction protein PilI -0.72
    5 GFF2155 Signal transduction histidine kinase CheA -0.72
    6 GFF4893 FIG00640418: hypothetical protein -0.71
    7 GFF4432 Two-component system response regulator protein -0.68
    8 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) -0.68
    9 GFF6723 Cysteine desulfurase (EC 2.8.1.7) -0.68
    10 GFF5416 Type IV fimbrial biogenesis protein PilW -0.67
    11 GFF412 Transcription-repair coupling factor -0.67
    12 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB -0.67
    13 GFF33 Type IV pilus biogenesis protein PilZ -0.66
    14 GFF5418 Type IV fimbrial biogenesis protein PilY1 -0.66
    15 GFF5415 Type IV fimbrial biogenesis protein PilV -0.66
    16 GFF3826 Response regulator receiver:LytTr DNA-binding region -0.66
    17 GFF6290 RNA polymerase sigma-54 factor RpoN -0.66
    18 GFF3068 FIG00538108: hypothetical protein -0.66
    19 GFF5417 hypothetical protein -0.66
    20 GFF5321 Type IV pilus biogenesis protein PilO -0.65

    Or look for positive cofitness